Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TOP1P11387 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.55■□□□□ 0.4
TOP1P11387 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
TOP1P11387 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 AC026748.1-201ENST00000624349 3251 ntBASIC17.55■□□□□ 0.4
TOP1P11387 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TOP1P11387 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOP1P11387 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 INE2-201ENST00000630399 1874 ntBASIC17.54■□□□□ 0.4
TOP1P11387 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TOP1P11387 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 AC011840.2-201ENST00000563063 1520 ntBASIC17.54■□□□□ 0.4
TOP1P11387 AC015818.8-201ENST00000587907 1519 ntBASIC17.54■□□□□ 0.4
TOP1P11387 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 MIR326-201ENST00000362220 95 ntBASIC17.54■□□□□ 0.4
TOP1P11387 AL136309.1-201ENST00000403917 691 ntBASIC17.54■□□□□ 0.4
TOP1P11387 CHMP1AP1-201ENST00000445563 662 ntBASIC17.54■□□□□ 0.4
TOP1P11387 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 RN7SL219P-201ENST00000582872 296 ntBASIC17.54■□□□□ 0.4
TOP1P11387 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.54■□□□□ 0.4
TOP1P11387 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.54■□□□□ 0.4
TOP1P11387 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TOP1P11387 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP1P11387 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TOP1P11387 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TOP1P11387 AC003102.2-201ENST00000589195 1469 ntBASIC17.53■□□□□ 0.4
TOP1P11387 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 TLE1P1-201ENST00000422965 589 ntBASIC17.53■□□□□ 0.4
TOP1P11387 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP1P11387 AC007969.1-201ENST00000433675 447 ntBASIC17.53■□□□□ 0.4
TOP1P11387 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP1P11387 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP1P11387 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.53■□□□□ 0.4
TOP1P11387 MIR4538-201ENST00000581377 78 ntBASIC17.53■□□□□ 0.4
TOP1P11387 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP1P11387 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP1P11387 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOP1P11387 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP1P11387 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms