Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AC020914.3-201ENST00000594712 304 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AC008825.2-201ENST00000603374 718 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AL023803.2-201ENST00000620080 638 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AL162426.1-201ENST00000624141 743 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AL139099.5-201ENST00000635274 300 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 KRT8P29-201ENST00000420409 1371 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AC138028.6-201ENST00000616106 1482 ntBASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLCF1Q9UBD9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 AC073347.1-201ENST00000421633 2643 ntBASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 CALR4P-201ENST00000431943 946 ntBASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 BX284668.4-201ENST00000453917 508 ntBASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 GCOM2-201ENST00000509133 1104 ntBASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 AC022748.3-201ENST00000621828 275 ntBASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLCF1Q9UBD9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 AC013268.4-201ENST00000637413 2228 ntBASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 AC006058.4-201ENST00000624016 1670 ntBASIC13.25□□□□□ -0.29
CLCF1Q9UBD9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms