Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX27Q96L92 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 KRT8P29-201ENST00000420409 1371 ntBASIC16.06■□□□□ 0.16
SNX27Q96L92 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SNX27Q96L92 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SNX27Q96L92 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SNX27Q96L92 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.06■□□□□ 0.16
SNX27Q96L92 PUDPP3-201ENST00000445368 636 ntBASIC16.06■□□□□ 0.16
SNX27Q96L92 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.06■□□□□ 0.16
SNX27Q96L92 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.06■□□□□ 0.16
SNX27Q96L92 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SNX27Q96L92 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX27Q96L92 AP003392.6-201ENST00000607709 325 ntBASIC16.06■□□□□ 0.16
SNX27Q96L92 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.06■□□□□ 0.16
SNX27Q96L92 AC022748.3-201ENST00000621828 275 ntBASIC16.06■□□□□ 0.16
SNX27Q96L92 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SNX27Q96L92 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.06■□□□□ 0.16
SNX27Q96L92 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SNX27Q96L92 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SNX27Q96L92 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX27Q96L92 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
SNX27Q96L92 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SNX27Q96L92 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 AC013726.1-201ENST00000563747 2285 ntBASIC16.05■□□□□ 0.16
SNX27Q96L92 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX27Q96L92 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.05■□□□□ 0.16
SNX27Q96L92 SERPINA13P-202ENST00000478994 924 ntBASIC16.05■□□□□ 0.16
SNX27Q96L92 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.05■□□□□ 0.16
SNX27Q96L92 PGAM1P5-201ENST00000548011 764 ntBASIC16.05■□□□□ 0.16
SNX27Q96L92 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.05■□□□□ 0.16
SNX27Q96L92 AC100827.2-201ENST00000563214 1194 ntBASIC16.05■□□□□ 0.16
SNX27Q96L92 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.05■□□□□ 0.16
SNX27Q96L92 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
SNX27Q96L92 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SNX27Q96L92 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.05■□□□□ 0.16
SNX27Q96L92 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNX27Q96L92 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SNX27Q96L92 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNX27Q96L92 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX27Q96L92 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SNX27Q96L92 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX27Q96L92 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX27Q96L92 CICP12-201ENST00000455801 843 ntBASIC16.04■□□□□ 0.16
SNX27Q96L92 AC021723.1-201ENST00000486306 515 ntBASIC16.04■□□□□ 0.16
SNX27Q96L92 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SNX27Q96L92 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX27Q96L92 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SNX27Q96L92 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.04■□□□□ 0.16
SNX27Q96L92 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SNX27Q96L92 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms