Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 NUS1P3-201ENST00000423502 862 ntBASIC16.91■□□□□ 0.3
SMARCE1Q969G3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 AL512638.1-201ENST00000457493 794 ntBASIC16.91■□□□□ 0.3
SMARCE1Q969G3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 RPL13AP25-201ENST00000484130 612 ntBASIC16.91■□□□□ 0.3
SMARCE1Q969G3 DOC2GP-202ENST00000514950 1163 ntBASIC16.91■□□□□ 0.3
SMARCE1Q969G3 AC022447.6-201ENST00000515522 438 ntBASIC16.91■□□□□ 0.3
SMARCE1Q969G3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 AC093813.1-201ENST00000605066 256 ntBASIC16.91■□□□□ 0.3
SMARCE1Q969G3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC006504.5-208ENST00000588784 2401 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AL359183.1-201ENST00000623796 2132 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC136759.1-202ENST00000530858 2194 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC093512.1-201ENST00000617969 520 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC152010.1-201ENST00000415779 2006 ntBASIC16.9■□□□□ 0.3
SMARCE1Q969G3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMARCE1Q969G3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMARCE1Q969G3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.89■□□□□ 0.3
SMARCE1Q969G3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.89■□□□□ 0.3
SMARCE1Q969G3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMARCE1Q969G3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.89■□□□□ 0.3
SMARCE1Q969G3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMARCE1Q969G3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms