Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.18□□□□□ -0.3
ZIC4Q8N9L1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZIC4Q8N9L1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
ZIC4Q8N9L1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
ZIC4Q8N9L1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
ZIC4Q8N9L1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ZIC4Q8N9L1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AP001267.2-201ENST00000532619 2086 ntBASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 PUDPP3-201ENST00000445368 636 ntBASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AL355994.2-201ENST00000447882 704 ntBASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AGGF1P1-201ENST00000509500 2073 ntBASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.17□□□□□ -0.3
ZIC4Q8N9L1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 AL023775.1-201ENST00000454907 1746 ntBASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 YBX1P6-201ENST00000442962 1002 ntBASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 HIST2H2BB-201ENST00000449108 381 ntBASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 RNA5SP412-201ENST00000516234 123 ntBASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 AC103988.2-201ENST00000561804 725 ntBASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 INTS4P1-203ENST00000641008 3683 ntBASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZIC4Q8N9L1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms