Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 AL157414.3-201ENST00000624276 1954 ntBASIC12.11□□□□□ -0.47
CX3CL1P78423 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CX3CL1P78423 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CX3CL1P78423 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.11□□□□□ -0.47
CX3CL1P78423 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.11□□□□□ -0.47
CX3CL1P78423 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.11□□□□□ -0.47
CX3CL1P78423 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CX3CL1P78423 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CX3CL1P78423 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.1□□□□□ -0.47
CX3CL1P78423 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.1□□□□□ -0.47
CX3CL1P78423 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.1□□□□□ -0.47
CX3CL1P78423 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.1□□□□□ -0.47
CX3CL1P78423 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.1□□□□□ -0.47
CX3CL1P78423 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.1□□□□□ -0.47
CX3CL1P78423 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.1□□□□□ -0.47
CX3CL1P78423 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CX3CL1P78423 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.1□□□□□ -0.47
CX3CL1P78423 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.1□□□□□ -0.47
CX3CL1P78423 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CX3CL1P78423 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.1□□□□□ -0.47
CX3CL1P78423 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.1□□□□□ -0.47
CX3CL1P78423 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.1□□□□□ -0.47
CX3CL1P78423 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.1□□□□□ -0.47
CX3CL1P78423 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 PRSS30P-206ENST00000641773 873 ntBASIC12.1□□□□□ -0.47
CX3CL1P78423 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
CX3CL1P78423 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms