Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SKP1P63208 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
SKP1P63208 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SKP1P63208 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 AC091951.1-201ENST00000512854 2465 ntBASIC14.22□□□□□ -0.13
SKP1P63208 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
SKP1P63208 SALL4P5-201ENST00000419001 1760 ntBASIC14.22□□□□□ -0.13
SKP1P63208 CLUHP2-201ENST00000426660 1303 ntBASIC14.22□□□□□ -0.13
SKP1P63208 FKBP4P6-201ENST00000457486 1332 ntBASIC14.22□□□□□ -0.13
SKP1P63208 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 MIR658-201ENST00000385210 100 ntBASIC14.22□□□□□ -0.13
SKP1P63208 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.22□□□□□ -0.13
SKP1P63208 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 AC022210.1-201ENST00000449856 793 ntBASIC14.22□□□□□ -0.13
SKP1P63208 AL590640.2-201ENST00000457038 527 ntBASIC14.22□□□□□ -0.13
SKP1P63208 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.22□□□□□ -0.13
SKP1P63208 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.22□□□□□ -0.13
SKP1P63208 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.22□□□□□ -0.13
SKP1P63208 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.22□□□□□ -0.13
SKP1P63208 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.22□□□□□ -0.13
SKP1P63208 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.22□□□□□ -0.13
SKP1P63208 ZACNP1-201ENST00000612259 710 ntBASIC14.22□□□□□ -0.13
SKP1P63208 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.22□□□□□ -0.13
SKP1P63208 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SKP1P63208 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.22□□□□□ -0.13
SKP1P63208 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 AP000593.2-201ENST00000542775 1433 ntBASIC14.22□□□□□ -0.13
SKP1P63208 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
SKP1P63208 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SKP1P63208 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.21□□□□□ -0.13
SKP1P63208 AC023090.2-201ENST00000625182 2110 ntBASIC14.21□□□□□ -0.13
SKP1P63208 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SKP1P63208 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.21□□□□□ -0.13
SKP1P63208 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SKP1P63208 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.21□□□□□ -0.13
SKP1P63208 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SKP1P63208 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.21□□□□□ -0.13
SKP1P63208 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 AC138696.2-201ENST00000607376 223 ntBASIC14.21□□□□□ -0.13
SKP1P63208 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.21□□□□□ -0.13
SKP1P63208 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SKP1P63208 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms