Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AC063926.2-201ENST00000623766 1308 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 MIR1202-201ENST00000408529 83 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 CD8B2-202ENST00000417670 633 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 AC234783.1-201ENST00000441761 496 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 RAB43P1-201ENST00000561790 589 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 RHOXF1P1-202ENST00000635473 501 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 BX640514.1-201ENST00000583223 1918 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 MYO15B-237ENST00000642007 4893 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 MRPL37P1-201ENST00000592451 1337 ntBASIC15.13■□□□□ 0.01
HLA-DQB2P05538 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DQB2P05538 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 AL161772.1-201ENST00000610494 4412 ntBASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 AC004945.1-201ENST00000416738 983 ntBASIC15.12■□□□□ 0.01
HLA-DQB2P05538 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 CTBP2P5-201ENST00000454986 1264 ntBASIC15.12■□□□□ 0.01
HLA-DQB2P05538 TPT1P11-201ENST00000458482 498 ntBASIC15.12■□□□□ 0.01
HLA-DQB2P05538 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DQB2P05538 AC073413.1-201ENST00000603927 732 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms