Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 PCDHA3-202ENST00000532566 4594 ntBASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHA4Q9UN74 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 HOMER2P2-201ENST00000451621 847 ntBASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 AP006547.1-201ENST00000563435 692 ntBASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 AL358472.3-201ENST00000608147 415 ntBASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 AP001002.3-201ENST00000623482 206 ntBASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHA4Q9UN74 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 INTS4P1-203ENST00000641008 3683 ntBASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AGGF1P1-201ENST00000509500 2073 ntBASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AP001267.2-201ENST00000532619 2086 ntBASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AL355994.2-201ENST00000447882 704 ntBASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 AL513477.1-201ENST00000602865 2407 ntBASIC17.02■□□□□ 0.32
PCDHA4Q9UN74 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHA4Q9UN74 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PCDHA4Q9UN74 FAM45BP-202ENST00000592932 1624 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms