Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AL121949.1-201ENST00000402043 968 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 ACA64.2-201ENST00000459014 129 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 KRT18P25-201ENST00000508931 1278 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TDH-203ENST00000531764 1110 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 MIR5189-201ENST00000577370 114 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AC008735.3-201ENST00000596646 500 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AP005019.2-201ENST00000615104 511 ntBASIC13.58□□□□□ -0.24
USB1Q9BQ65 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.58□□□□□ -0.24
USB1Q9BQ65 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
USB1Q9BQ65 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 CDY3P-201ENST00000454543 1618 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 DGCR9-201ENST00000609630 2415 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 BAATP1-201ENST00000412284 1225 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 MTND2P15-201ENST00000418575 892 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 AC012454.1-201ENST00000443948 995 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 GAPDHP40-201ENST00000505218 1006 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 AC068587.3-201ENST00000526613 355 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
USB1Q9BQ65 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.57□□□□□ -0.24
USB1Q9BQ65 Z82170.1-201ENST00000625081 3192 ntBASIC13.57□□□□□ -0.24
USB1Q9BQ65 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
USB1Q9BQ65 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.56□□□□□ -0.24
USB1Q9BQ65 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms