Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC015936.2-201ENST00000593177 259 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 AL049840.4-201ENST00000602422 811 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 AC097359.3-201ENST00000603982 1210 ntBASIC13.34□□□□□ -0.27
VRK1Q99986 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
VRK1Q99986 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.34□□□□□ -0.27
VRK1Q99986 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.34□□□□□ -0.27
VRK1Q99986 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.34□□□□□ -0.27
VRK1Q99986 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
VRK1Q99986 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VRK1Q99986 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VRK1Q99986 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.33□□□□□ -0.27
VRK1Q99986 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VRK1Q99986 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VRK1Q99986 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VRK1Q99986 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 AL359183.1-201ENST00000623796 2132 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
VRK1Q99986 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
VRK1Q99986 MIR658-201ENST00000385210 100 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
VRK1Q99986 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 KRT18P43-201ENST00000469825 1281 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 TDH-203ENST00000531764 1110 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.33□□□□□ -0.28
VRK1Q99986 AC008735.3-201ENST00000596646 500 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 AL391069.4-201ENST00000609583 481 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 MIR6752-201ENST00000618442 71 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 INTS4P2-202ENST00000614726 2019 ntBASIC13.33□□□□□ -0.28
VRK1Q99986 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VRK1Q99986 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
VRK1Q99986 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VRK1Q99986 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 LINC01230-201ENST00000625222 3017 ntBASIC13.32□□□□□ -0.28
VRK1Q99986 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.32□□□□□ -0.28
VRK1Q99986 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VRK1Q99986 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.32□□□□□ -0.28
VRK1Q99986 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VRK1Q99986 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms