Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.42□□□□□ -0.42
S1PR3Q99500 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.42□□□□□ -0.42
S1PR3Q99500 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 AC099568.2-201ENST00000609194 695 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 BX539320.1-201ENST00000623759 877 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 AC139749.1-202ENST00000617529 3139 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
S1PR3Q99500 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.41□□□□□ -0.42
S1PR3Q99500 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.41□□□□□ -0.42
S1PR3Q99500 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.41□□□□□ -0.42
S1PR3Q99500 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.41□□□□□ -0.42
S1PR3Q99500 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 AC007431.3-201ENST00000623221 587 ntBASIC12.41□□□□□ -0.42
S1PR3Q99500 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
S1PR3Q99500 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
S1PR3Q99500 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.41□□□□□ -0.42
S1PR3Q99500 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
S1PR3Q99500 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
S1PR3Q99500 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.4□□□□□ -0.42
S1PR3Q99500 INTS4P2-202ENST00000614726 2019 ntBASIC12.4□□□□□ -0.42
S1PR3Q99500 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms