Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AC027601.5-201ENST00000624065 2482 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AC018442.1-201ENST00000421439 2061 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AC098614.1-201ENST00000368528 745 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AL035633.1-201ENST00000406139 838 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 AP006294.1-201ENST00000415407 339 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AL359711.2-201ENST00000563105 872 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 WFDC1-204ENST00000613603 549 ntBASIC14.21□□□□□ -0.13
COL21A1Q96P44 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.21□□□□□ -0.13
COL21A1Q96P44 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COL21A1Q96P44 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL21A1Q96P44 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL21A1Q96P44 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
COL21A1Q96P44 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COL21A1Q96P44 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.21□□□□□ -0.14
COL21A1Q96P44 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COL21A1Q96P44 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.21□□□□□ -0.14
COL21A1Q96P44 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
COL21A1Q96P44 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
COL21A1Q96P44 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC126335.2-201ENST00000623362 4637 ntBASIC14.2□□□□□ -0.14
COL21A1Q96P44 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC004066.1-201ENST00000502488 802 ntBASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC124283.3-201ENST00000570869 594 ntBASIC14.2□□□□□ -0.14
COL21A1Q96P44 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 LINC02084-201ENST00000606069 1096 ntBASIC14.2□□□□□ -0.14
COL21A1Q96P44 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.2□□□□□ -0.14
COL21A1Q96P44 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL21A1Q96P44 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms