Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 YBX2P1-201ENST00000394192 760 ntBASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 RN7SL589P-201ENST00000481268 310 ntBASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AC027307.2-201ENST00000591252 911 ntBASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP6Q96FZ7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP6Q96FZ7 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AC015910.1-201ENST00000579400 975 ntBASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 MTDHP5-201ENST00000598980 586 ntBASIC15.12■□□□□ 0.01
CHMP6Q96FZ7 AC092902.6-201ENST00000641783 218 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms