Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.81■□□□□ 0.44
SNED1Q8TER0 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 AC092580.1-201ENST00000433998 658 ntBASIC17.8■□□□□ 0.44
SNED1Q8TER0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 AC093826.1-201ENST00000508655 993 ntBASIC17.8■□□□□ 0.44
SNED1Q8TER0 AC084752.1-201ENST00000509766 622 ntBASIC17.8■□□□□ 0.44
SNED1Q8TER0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 AC068867.1-201ENST00000559855 150 ntBASIC17.8■□□□□ 0.44
SNED1Q8TER0 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.8■□□□□ 0.44
SNED1Q8TER0 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 LINC01101-201ENST00000622953 1884 ntBASIC17.8■□□□□ 0.44
SNED1Q8TER0 AC073592.2-201ENST00000623062 780 ntBASIC17.8■□□□□ 0.44
SNED1Q8TER0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNED1Q8TER0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 GCSHP3-201ENST00000431120 391 ntBASIC17.79■□□□□ 0.44
SNED1Q8TER0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 RN7SL530P-201ENST00000485097 298 ntBASIC17.79■□□□□ 0.44
SNED1Q8TER0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 AC002044.2-201ENST00000624910 970 ntBASIC17.79■□□□□ 0.44
SNED1Q8TER0 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 AC002472.4-201ENST00000641915 272 ntBASIC17.79■□□□□ 0.44
SNED1Q8TER0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNED1Q8TER0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SNED1Q8TER0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNED1Q8TER0 AC138035.3-201ENST00000622706 2791 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SNED1Q8TER0 MRPL37P1-201ENST00000592451 1337 ntBASIC17.78■□□□□ 0.44
SNED1Q8TER0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms