Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 MIR6720-201ENST00000611664 98 ntBASIC20.5■□□□□ 0.87
CDCA8Q53HL2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 AC018529.2-202ENST00000611482 3087 ntBASIC20.49■□□□□ 0.87
CDCA8Q53HL2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 RN7SL163P-201ENST00000583100 276 ntBASIC20.49■□□□□ 0.87
CDCA8Q53HL2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 AC244452.3-201ENST00000636814 210 ntBASIC20.49■□□□□ 0.87
CDCA8Q53HL2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 AC009093.10-201ENST00000641956 1442 ntBASIC20.49■□□□□ 0.87
CDCA8Q53HL2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.49■□□□□ 0.87
CDCA8Q53HL2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 AL157407.1-201ENST00000435784 904 ntBASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 AC106794.1-201ENST00000506935 792 ntBASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ZNF767P-206ENST00000513792 565 ntBASIC20.48■□□□□ 0.87
CDCA8Q53HL2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 AC244093.1-201ENST00000610837 814 ntBASIC20.48■□□□□ 0.87
CDCA8Q53HL2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 AL008718.2-201ENST00000609206 1313 ntBASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDCA8Q53HL2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 DPM3-202ENST00000368399 517 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 RNMTL1P1-201ENST00000454103 560 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC099548.2-209ENST00000480264 625 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC103810.3-201ENST00000583567 96 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 Z98259.2-201ENST00000641583 609 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC004923.1-202ENST00000642106 209 ntBASIC20.47■□□□□ 0.87
CDCA8Q53HL2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDCA8Q53HL2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms