Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USP6P35125 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 IL9RP3-201ENST00000442856 1674 ntBASIC19.76■□□□□ 0.75
USP6P35125 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.76■□□□□ 0.75
USP6P35125 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
USP6P35125 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP6P35125 AC012362.1-201ENST00000434906 739 ntBASIC19.76■□□□□ 0.75
USP6P35125 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC19.76■□□□□ 0.75
USP6P35125 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.76■□□□□ 0.75
USP6P35125 AP000911.2-201ENST00000534330 502 ntBASIC19.76■□□□□ 0.75
USP6P35125 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.76■□□□□ 0.75
USP6P35125 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.76■□□□□ 0.75
USP6P35125 MIR6756-201ENST00000616240 63 ntBASIC19.76■□□□□ 0.75
USP6P35125 AC009084.3-201ENST00000623356 437 ntBASIC19.76■□□□□ 0.75
USP6P35125 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.76■□□□□ 0.75
USP6P35125 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP6P35125 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
USP6P35125 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USP6P35125 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.75■□□□□ 0.75
USP6P35125 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.75■□□□□ 0.75
USP6P35125 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.75■□□□□ 0.75
USP6P35125 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 LINC00528-201ENST00000600723 2160 ntBASIC19.75■□□□□ 0.75
USP6P35125 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 GUSBP10-201ENST00000417412 665 ntBASIC19.75■□□□□ 0.75
USP6P35125 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.75■□□□□ 0.75
USP6P35125 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP6P35125 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USP6P35125 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.75■□□□□ 0.75
USP6P35125 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP6P35125 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.74■□□□□ 0.75
USP6P35125 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
USP6P35125 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.74■□□□□ 0.75
USP6P35125 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.74■□□□□ 0.75
USP6P35125 LINC01815-202ENST00000641468 1409 ntBASIC19.74■□□□□ 0.75
USP6P35125 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 HLA-DMA-203ENST00000395305 777 ntBASIC19.74■□□□□ 0.75
USP6P35125 AL357563.1-201ENST00000404728 395 ntBASIC19.74■□□□□ 0.75
USP6P35125 AC073869.2-201ENST00000417338 1026 ntBASIC19.74■□□□□ 0.75
USP6P35125 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 PIN4P1-201ENST00000451079 396 ntBASIC19.74■□□□□ 0.75
USP6P35125 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.74■□□□□ 0.75
USP6P35125 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.74■□□□□ 0.75
USP6P35125 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.74■□□□□ 0.75
USP6P35125 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.74■□□□□ 0.75
USP6P35125 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.74■□□□□ 0.75
USP6P35125 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.74■□□□□ 0.75
USP6P35125 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP6P35125 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 BRD7P5-201ENST00000299197 1822 ntBASIC19.73■□□□□ 0.75
USP6P35125 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.73■□□□□ 0.75
USP6P35125 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 AC018442.1-201ENST00000421439 2061 ntBASIC19.73■□□□□ 0.75
USP6P35125 AGAP7P-201ENST00000582299 2062 ntBASIC19.73■□□□□ 0.75
USP6P35125 AGAP14-201ENST00000624701 2060 ntBASIC19.73■□□□□ 0.75
USP6P35125 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
USP6P35125 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP6P35125 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms