Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.33■□□□□ 0.2
RFX1P22670 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.33■□□□□ 0.2
RFX1P22670 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFX1P22670 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RFX1P22670 AC005089.1-201ENST00000619486 2241 ntBASIC16.33■□□□□ 0.2
RFX1P22670 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFX1P22670 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RFX1P22670 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 ELK2AP-201ENST00000392510 1007 ntBASIC16.32■□□□□ 0.2
RFX1P22670 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 SLC25A24P2-201ENST00000415059 510 ntBASIC16.32■□□□□ 0.2
RFX1P22670 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.32■□□□□ 0.2
RFX1P22670 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.32■□□□□ 0.2
RFX1P22670 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 AC114812.1-204ENST00000449669 728 ntBASIC16.32■□□□□ 0.2
RFX1P22670 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 AC113367.3-201ENST00000508316 1912 ntBASIC16.32■□□□□ 0.2
RFX1P22670 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 RN7SL190P-201ENST00000582519 257 ntBASIC16.32■□□□□ 0.2
RFX1P22670 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.32■□□□□ 0.2
RFX1P22670 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 RPSAP52-203ENST00000622976 1023 ntBASIC16.32■□□□□ 0.2
RFX1P22670 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFX1P22670 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.32■□□□□ 0.2
RFX1P22670 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFX1P22670 AL009178.2-201ENST00000597278 2719 ntBASIC16.32■□□□□ 0.2
RFX1P22670 MYO15B-237ENST00000642007 4893 ntBASIC16.31■□□□□ 0.2
RFX1P22670 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.31■□□□□ 0.2
RFX1P22670 AC023090.2-201ENST00000625182 2110 ntBASIC16.31■□□□□ 0.2
RFX1P22670 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFX1P22670 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RFX1P22670 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RFX1P22670 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RFX1P22670 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.31■□□□□ 0.2
RFX1P22670 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RFX1P22670 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.31■□□□□ 0.2
RFX1P22670 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.31■□□□□ 0.2
RFX1P22670 AC016694.1-201ENST00000434179 700 ntBASIC16.31■□□□□ 0.2
RFX1P22670 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.31■□□□□ 0.2
RFX1P22670 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.31■□□□□ 0.2
RFX1P22670 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.31■□□□□ 0.2
RFX1P22670 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.31■□□□□ 0.2
RFX1P22670 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.31■□□□□ 0.2
RFX1P22670 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.31■□□□□ 0.2
RFX1P22670 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX1P22670 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms