Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HLA-DQB2P05538 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC092135.3-201ENST00000624151 1846 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AL513477.1-201ENST00000602865 2407 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 FAM8A4P-201ENST00000435433 1213 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC022447.6-201ENST00000515522 438 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AL512343.1-201ENST00000605837 169 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AL162274.1-201ENST00000617191 1098 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 AL354989.2-201ENST00000435838 1540 ntBASIC15.15■□□□□ 0.02
HLA-DQB2P05538 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DQB2P05538 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 PKD1P5-201ENST00000532415 10291 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AL009178.2-201ENST00000597278 2719 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AC006001.1-201ENST00000325130 474 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ANKRD19P-201ENST00000338192 862 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 RPL7P3-201ENST00000441388 714 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 AP000812.2-201ENST00000538934 718 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 SNX29P1-201ENST00000548357 1007 ntBASIC15.14■□□□□ 0.01
HLA-DQB2P05538 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DQB2P05538 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms