Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC4O75487 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC4O75487 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GPC4O75487 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GPC4O75487 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
GPC4O75487 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC4O75487 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.09■□□□□ 0.01
GPC4O75487 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.09■□□□□ 0.01
GPC4O75487 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.09■□□□□ 0.01
GPC4O75487 AL359711.2-201ENST00000563105 872 ntBASIC15.09■□□□□ 0.01
GPC4O75487 WASH4P-201ENST00000564273 1246 ntBASIC15.09■□□□□ 0.01
GPC4O75487 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 AC007787.1-201ENST00000588095 1583 ntBASIC15.09■□□□□ 0.01
GPC4O75487 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.09■□□□□ 0.01
GPC4O75487 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.09■□□□□ 0.01
GPC4O75487 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC4O75487 KRT8P22-201ENST00000562317 1415 ntBASIC15.09■□□□□ 0.01
GPC4O75487 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.08■□□□□ 0.01
GPC4O75487 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.08■□□□□ 0.01
GPC4O75487 AC012508.2-201ENST00000567613 1472 ntBASIC15.08■□□□□ 0.01
GPC4O75487 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
GPC4O75487 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.08■□□□□ 0.01
GPC4O75487 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.08■□□□□ 0.01
GPC4O75487 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GPC4O75487 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.08■□□□□ 0
GPC4O75487 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 REXO1L4P-201ENST00000605109 1937 ntBASIC15.08■□□□□ 0
GPC4O75487 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 DGCR5-201ENST00000399539 862 ntBASIC15.08■□□□□ 0
GPC4O75487 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.08■□□□□ 0
GPC4O75487 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.08■□□□□ 0
GPC4O75487 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.08■□□□□ 0
GPC4O75487 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.08■□□□□ 0
GPC4O75487 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.08■□□□□ 0
GPC4O75487 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.08■□□□□ 0
GPC4O75487 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
GPC4O75487 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
GPC4O75487 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.07■□□□□ 0
GPC4O75487 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 AP000845.1-201ENST00000581677 2131 ntBASIC15.07■□□□□ 0
GPC4O75487 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.07■□□□□ 0
GPC4O75487 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
GPC4O75487 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.07■□□□□ 0
GPC4O75487 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms