Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 SALL4P5-201ENST00000419001 1760 ntBASIC13.35□□□□□ -0.27
TRAF3IP2O43734 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 AC113367.3-201ENST00000508316 1912 ntBASIC13.35□□□□□ -0.27
TRAF3IP2O43734 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 MESTP3-201ENST00000503460 968 ntBASIC13.35□□□□□ -0.27
TRAF3IP2O43734 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 BTNL10-201ENST00000595971 695 ntBASIC13.35□□□□□ -0.27
TRAF3IP2O43734 AL022328.1-201ENST00000610050 478 ntBASIC13.35□□□□□ -0.27
TRAF3IP2O43734 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAF3IP2O43734 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 INTS4P1-203ENST00000641008 3683 ntBASIC13.34□□□□□ -0.27
TRAF3IP2O43734 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.34□□□□□ -0.27
TRAF3IP2O43734 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 RN7SKP230-201ENST00000365642 335 ntBASIC13.34□□□□□ -0.27
TRAF3IP2O43734 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AC138696.2-201ENST00000607376 223 ntBASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AC138466.3-201ENST00000619983 221 ntBASIC13.34□□□□□ -0.27
TRAF3IP2O43734 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF3IP2O43734 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms