Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNQ3O43525 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNQ3O43525 AC018629.1-201ENST00000623381 1736 ntBASIC18.97■□□□□ 0.63
KCNQ3O43525 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNQ3O43525 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 AC144831.1-201ENST00000573312 2656 ntBASIC18.97■□□□□ 0.63
KCNQ3O43525 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 LINC01165-201ENST00000445190 1623 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
KCNQ3O43525 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 AC092135.3-201ENST00000624151 1846 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 AC239868.1-201ENST00000369385 493 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AC006335.1-201ENST00000445200 547 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 RBM8B-201ENST00000555532 525 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 AL109837.1-201ENST00000603272 613 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AC133540.1-201ENST00000620845 1019 ntBASIC18.96■□□□□ 0.63
KCNQ3O43525 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KCNQ3O43525 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNQ3O43525 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNQ3O43525 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 AC069218.1-201ENST00000435269 762 ntBASIC18.95■□□□□ 0.62
KCNQ3O43525 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.95■□□□□ 0.62
KCNQ3O43525 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 IGLV3-15-201ENST00000518356 244 ntBASIC18.95■□□□□ 0.62
KCNQ3O43525 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
KCNQ3O43525 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
KCNQ3O43525 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.95■□□□□ 0.62
KCNQ3O43525 AC006453.1-201ENST00000636037 1257 ntBASIC18.95■□□□□ 0.62
KCNQ3O43525 AC018442.1-201ENST00000421439 2061 ntBASIC18.95■□□□□ 0.62
KCNQ3O43525 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNQ3O43525 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KCNQ3O43525 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNQ3O43525 AC139712.1-201ENST00000378256 1875 ntBASIC18.94■□□□□ 0.62
KCNQ3O43525 AC126177.1-201ENST00000547829 2218 ntBASIC18.94■□□□□ 0.62
KCNQ3O43525 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
KCNQ3O43525 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KCNQ3O43525 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms