Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
R3HCC1Q9Y3T6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 RPL37AP1-201ENST00000412502 279 ntBASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 KRT8P37-201ENST00000451609 1420 ntBASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 AC100757.3-201ENST00000622361 1406 ntBASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
R3HCC1Q9Y3T6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC134407.2-201ENST00000625089 1978 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC113367.3-201ENST00000508316 1912 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 FO393414.2-201ENST00000405153 598 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 FAM8A3P-201ENST00000427218 844 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC005498.2-205ENST00000593218 784 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 TEX28P1-201ENST00000613479 1221 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 TEX28P2-201ENST00000617764 1221 ntBASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3HCC1Q9Y3T6 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3HCC1Q9Y3T6 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms