Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 PRSS29P-201ENST00000440800 595 ntBASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 KRT18P3-201ENST00000451602 1288 ntBASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AC108073.2-201ENST00000464002 357 ntBASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 POLD2P1-201ENST00000511220 997 ntBASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 MIR4751-201ENST00000578027 74 ntBASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AC023511.2-201ENST00000618803 211 ntBASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AGGF1P1-201ENST00000509500 2073 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 MRPL20P1-201ENST00000400819 433 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 MIR940-201ENST00000401276 94 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 CRYGEP-201ENST00000412192 528 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 VENTXP1-201ENST00000569334 2716 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 AC012617.1-204ENST00000586340 2305 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRCH1Q9Y2L9 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms