Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 LINC01101-201ENST00000622953 1884 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 CLUHP2-201ENST00000426660 1303 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 RPL5P21-201ENST00000404620 815 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 CYP46A4P-201ENST00000414953 267 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AL354877.1-201ENST00000424412 413 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 FTLP10-202ENST00000505798 471 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AC100850.1-201ENST00000506768 649 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AC015967.2-201ENST00000624092 234 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AC006435.4-201ENST00000625037 234 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AL356737.1-201ENST00000634391 234 ntBASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TM9SF3Q9HD45 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 MIR769-201ENST00000390225 118 ntBASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AL136309.1-201ENST00000403917 691 ntBASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 HLA-K-203ENST00000430151 1046 ntBASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 CHMP4BP1-201ENST00000556017 588 ntBASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AC016629.1-201ENST00000596579 586 ntBASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 AC004466.1-201ENST00000599515 1080 ntBASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF3Q9HD45 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms