Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 AL355864.2-201ENST00000447420 863 ntBASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDLIM5Q96HC4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PDLIM5Q96HC4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
PDLIM5Q96HC4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.58□□□□□ -0.07
PDLIM5Q96HC4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
PDLIM5Q96HC4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.58□□□□□ -0.07
PDLIM5Q96HC4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC092933.1-201ENST00000393644 945 ntBASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 CD8B2-202ENST00000417670 633 ntBASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC106760.1-201ENST00000508690 800 ntBASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 SLC25A47P1-201ENST00000531577 414 ntBASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 INE2-201ENST00000630399 1874 ntBASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM5Q96HC4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 TPM3P8-201ENST00000330554 643 ntBASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 RN7SKP175-201ENST00000408472 289 ntBASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 RNA5SP486-201ENST00000515961 83 ntBASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms