Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 TUBB1P2-201ENST00000422712 1306 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 C2orf27AP3-201ENST00000434123 579 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 TUBB1P1-201ENST00000503144 1300 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 GAPDHP40-201ENST00000505218 1006 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 AP001582.1-201ENST00000525856 295 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 AC079316.1-201ENST00000548397 411 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 AC107373.2-201ENST00000607735 490 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 AC244669.2-201ENST00000612320 853 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 AL354718.3-201ENST00000616414 581 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 CR382287.1-201ENST00000623954 586 ntBASIC17.85■□□□□ 0.45
DDX11Q96FC9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX11Q96FC9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX11Q96FC9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX11Q96FC9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
DDX11Q96FC9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AC117489.1-201ENST00000625169 3217 ntBASIC17.84■□□□□ 0.45
DDX11Q96FC9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 OR2I1P-210ENST00000642037 4691 ntBASIC17.84■□□□□ 0.45
DDX11Q96FC9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
DDX11Q96FC9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DDX11Q96FC9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.83■□□□□ 0.45
DDX11Q96FC9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
DDX11Q96FC9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.83■□□□□ 0.45
DDX11Q96FC9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 AC007787.1-201ENST00000588095 1583 ntBASIC17.83■□□□□ 0.45
DDX11Q96FC9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.83■□□□□ 0.45
DDX11Q96FC9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.83■□□□□ 0.45
DDX11Q96FC9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 LILRP1-201ENST00000444199 1370 ntBASIC17.83■□□□□ 0.45
DDX11Q96FC9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
DDX11Q96FC9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 YBX1P6-201ENST00000442962 1002 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC022137.2-201ENST00000503482 481 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC010328.2-201ENST00000597698 1111 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms