Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT4Q643R3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AC142381.1-201ENST00000426099 345 ntBASIC14.15□□□□□ -0.14
LPCAT4Q643R3 HCG4B-203ENST00000450128 991 ntBASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AC007064.4-201ENST00000637740 555 ntBASIC14.15□□□□□ -0.14
LPCAT4Q643R3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.15□□□□□ -0.14
LPCAT4Q643R3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AC090643.2-201ENST00000623442 2029 ntBASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AL031595.1-201ENST00000623969 4709 ntBASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT4Q643R3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms