Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.66□□□□□ -0.22
LCN1P1Q5VSP4 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 AC004066.1-201ENST00000502488 802 ntBASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 LINC01115-203ENST00000606068 577 ntBASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 MST1P2-201ENST00000457982 2291 ntBASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.65□□□□□ -0.22
LCN1P1Q5VSP4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 AC015802.1-201ENST00000588104 1449 ntBASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 AL122018.1-201ENST00000446607 2310 ntBASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 TPT1P11-201ENST00000458482 498 ntBASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCN1P1Q5VSP4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms