Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AL445209.1-201ENST00000607269 3491 ntBASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 HNRNPDP1-201ENST00000439535 754 ntBASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AC108751.1-201ENST00000490852 363 ntBASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AC015910.1-201ENST00000579400 975 ntBASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC6LQ2NKX8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 AC023141.13-201ENST00000604991 943 ntBASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 AC025181.2-201ENST00000606994 802 ntBASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC6LQ2NKX8 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 AC090643.2-201ENST00000623442 2029 ntBASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 RN7SL832P-201ENST00000607781 1756 ntBASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC6LQ2NKX8 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms