Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SKP1P63208 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 AC006001.1-201ENST00000325130 474 ntBASIC14.26□□□□□ -0.13
SKP1P63208 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 AC079776.1-201ENST00000401540 1152 ntBASIC14.26□□□□□ -0.13
SKP1P63208 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 FAM197Y7-201ENST00000432892 766 ntBASIC14.26□□□□□ -0.13
SKP1P63208 FAM8A4P-201ENST00000435433 1213 ntBASIC14.26□□□□□ -0.13
SKP1P63208 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.26□□□□□ -0.13
SKP1P63208 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.26□□□□□ -0.13
SKP1P63208 MESTP3-201ENST00000503460 968 ntBASIC14.26□□□□□ -0.13
SKP1P63208 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.26□□□□□ -0.13
SKP1P63208 HILS1-202ENST00000545329 423 ntBASIC14.26□□□□□ -0.13
SKP1P63208 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.26□□□□□ -0.13
SKP1P63208 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.26□□□□□ -0.13
SKP1P63208 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SKP1P63208 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SKP1P63208 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SKP1P63208 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.26□□□□□ -0.13
SKP1P63208 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SKP1P63208 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.25□□□□□ -0.13
SKP1P63208 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SKP1P63208 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.25□□□□□ -0.13
SKP1P63208 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SKP1P63208 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 POM121L8P-201ENST00000417732 1281 ntBASIC14.25□□□□□ -0.13
SKP1P63208 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.25□□□□□ -0.13
SKP1P63208 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.25□□□□□ -0.13
SKP1P63208 POM121L9P-203ENST00000441984 1285 ntBASIC14.25□□□□□ -0.13
SKP1P63208 YBX1P6-201ENST00000442962 1002 ntBASIC14.25□□□□□ -0.13
SKP1P63208 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.25□□□□□ -0.13
SKP1P63208 KRT223P-202ENST00000449164 1292 ntBASIC14.25□□□□□ -0.13
SKP1P63208 CROCCP4-201ENST00000457096 498 ntBASIC14.25□□□□□ -0.13
SKP1P63208 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.25□□□□□ -0.13
SKP1P63208 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 AL359881.2-201ENST00000602973 570 ntBASIC14.25□□□□□ -0.13
SKP1P63208 ECM1P1-201ENST00000604092 1279 ntBASIC14.25□□□□□ -0.13
SKP1P63208 AC138466.3-201ENST00000619983 221 ntBASIC14.25□□□□□ -0.13
SKP1P63208 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.25□□□□□ -0.13
SKP1P63208 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SKP1P63208 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
SKP1P63208 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SKP1P63208 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms