Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.48■□□□□ 0.23
CDK7P50613 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK7P50613 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDK7P50613 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDK7P50613 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.47■□□□□ 0.23
CDK7P50613 RPL7P35-201ENST00000446943 740 ntBASIC16.47■□□□□ 0.23
CDK7P50613 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK7P50613 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.47■□□□□ 0.23
CDK7P50613 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 MIR6720-201ENST00000611664 98 ntBASIC16.47■□□□□ 0.23
CDK7P50613 AP001065.2-201ENST00000617205 644 ntBASIC16.47■□□□□ 0.23
CDK7P50613 AC242376.2-201ENST00000619355 883 ntBASIC16.47■□□□□ 0.23
CDK7P50613 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDK7P50613 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK7P50613 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK7P50613 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK7P50613 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK7P50613 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 AC074138.1-201ENST00000611182 1303 ntBASIC16.46■□□□□ 0.23
CDK7P50613 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDK7P50613 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 RPS9P1-201ENST00000419943 583 ntBASIC16.46■□□□□ 0.23
CDK7P50613 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 AC026320.2-201ENST00000434379 478 ntBASIC16.46■□□□□ 0.23
CDK7P50613 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.46■□□□□ 0.23
CDK7P50613 ALG3P1-201ENST00000508806 1114 ntBASIC16.46■□□□□ 0.23
CDK7P50613 AP002803.1-201ENST00000528836 498 ntBASIC16.46■□□□□ 0.23
CDK7P50613 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CDK7P50613 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.46■□□□□ 0.23
CDK7P50613 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK7P50613 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK7P50613 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.46■□□□□ 0.23
CDK7P50613 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK7P50613 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK7P50613 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
CDK7P50613 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDK7P50613 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK7P50613 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.46■□□□□ 0.23
CDK7P50613 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK7P50613 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK7P50613 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK7P50613 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDK7P50613 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms