Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.8□□□□□ -0.2
SHC1P29353 AC011495.1-201ENST00000498085 584 ntBASIC13.8□□□□□ -0.2
SHC1P29353 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 ENPP7P5-201ENST00000541031 1031 ntBASIC13.8□□□□□ -0.2
SHC1P29353 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
SHC1P29353 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 BX539320.1-201ENST00000623759 877 ntBASIC13.8□□□□□ -0.2
SHC1P29353 AL035252.4-201ENST00000624174 288 ntBASIC13.8□□□□□ -0.2
SHC1P29353 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.8□□□□□ -0.2
SHC1P29353 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHC1P29353 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SHC1P29353 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 TTTY23B-201ENST00000442790 549 ntBASIC13.79□□□□□ -0.2
SHC1P29353 GAPDHP21-201ENST00000450301 1010 ntBASIC13.79□□□□□ -0.2
SHC1P29353 TDH-203ENST00000531764 1110 ntBASIC13.79□□□□□ -0.2
SHC1P29353 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SHC1P29353 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.79□□□□□ -0.2
SHC1P29353 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SHC1P29353 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHC1P29353 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.79□□□□□ -0.2
SHC1P29353 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHC1P29353 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SHC1P29353 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms