Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col8a2P25318 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col8a2P25318 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col8a2P25318 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Col8a2P25318 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Col8a2P25318 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col8a2P25318 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Col8a2P25318 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Col8a2P25318 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Col8a2P25318 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.9□□□□□ -0.83
Col8a2P25318 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Col8a2P25318 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.89□□□□□ -0.83
Col8a2P25318 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm9211-201ENSMUST00000182882 975 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 Gm27390-201ENSMUST00000184516 176 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 Gm45770-201ENSMUST00000212105 616 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm6867-201ENSMUST00000219165 425 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Pck2-205ENSMUST00000226352 2784 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.89□□□□□ -0.83
Col8a2P25318 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Col8a2P25318 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Col8a2P25318 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Col8a2P25318 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col8a2P25318 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm16166-201ENSMUST00000118291 787 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Gm11956-201ENSMUST00000119525 512 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Gm14441-201ENSMUST00000121960 540 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm9192-201ENSMUST00000183221 985 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Gm37835-201ENSMUST00000193305 361 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Gm44126-201ENSMUST00000204831 514 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Col8a2P25318 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col8a2P25318 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Col8a2P25318 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms