Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.79□□□□□ -0.04
CDH3P22223 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH3P22223 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.79□□□□□ -0.04
CDH3P22223 PDIA3P1-201ENST00000471856 1510 ntBASIC14.79□□□□□ -0.04
CDH3P22223 AC106760.1-201ENST00000508690 800 ntBASIC14.79□□□□□ -0.04
CDH3P22223 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 AP005482.1-201ENST00000563722 1273 ntBASIC14.79□□□□□ -0.04
CDH3P22223 AC090616.6-203ENST00000579186 1945 ntBASIC14.79□□□□□ -0.04
CDH3P22223 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.79□□□□□ -0.04
CDH3P22223 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDH3P22223 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH3P22223 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH3P22223 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH3P22223 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH3P22223 AC087481.3-201ENST00000602886 1894 ntBASIC14.78□□□□□ -0.04
CDH3P22223 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH3P22223 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 KRT8P35-201ENST00000483942 1338 ntBASIC14.78□□□□□ -0.04
CDH3P22223 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH3P22223 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH3P22223 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH3P22223 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 C2orf27AP3-201ENST00000434123 579 ntBASIC14.78□□□□□ -0.04
CDH3P22223 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CDH3P22223 KLF2P4-201ENST00000451959 1225 ntBASIC14.78□□□□□ -0.04
CDH3P22223 CTBP2P5-201ENST00000454986 1264 ntBASIC14.78□□□□□ -0.04
CDH3P22223 FTH1P14-201ENST00000482930 551 ntBASIC14.78□□□□□ -0.04
CDH3P22223 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH3P22223 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH3P22223 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH3P22223 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH3P22223 AL354718.3-201ENST00000616414 581 ntBASIC14.78□□□□□ -0.04
CDH3P22223 MIR6775-201ENST00000617557 69 ntBASIC14.78□□□□□ -0.04
CDH3P22223 MIR6752-201ENST00000618442 71 ntBASIC14.78□□□□□ -0.04
CDH3P22223 CR382287.1-201ENST00000623954 586 ntBASIC14.78□□□□□ -0.04
CDH3P22223 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms