Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.51■□□□□ 0.07
CD48P09326 POM121L9P-203ENST00000441984 1285 ntBASIC15.51■□□□□ 0.07
CD48P09326 TPT1P11-201ENST00000458482 498 ntBASIC15.51■□□□□ 0.07
CD48P09326 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.51■□□□□ 0.07
CD48P09326 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 AP005018.1-201ENST00000525475 301 ntBASIC15.51■□□□□ 0.07
CD48P09326 AC068587.3-201ENST00000526613 355 ntBASIC15.51■□□□□ 0.07
CD48P09326 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 PTP4A1P2-201ENST00000546033 454 ntBASIC15.51■□□□□ 0.07
CD48P09326 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.51■□□□□ 0.07
CD48P09326 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.51■□□□□ 0.07
CD48P09326 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CD48P09326 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.51■□□□□ 0.07
CD48P09326 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CD48P09326 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.51■□□□□ 0.07
CD48P09326 AL161772.1-201ENST00000610494 4412 ntBASIC15.51■□□□□ 0.07
CD48P09326 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 AL138725.1-201ENST00000407347 1314 ntBASIC15.5■□□□□ 0.07
CD48P09326 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 AC011840.2-201ENST00000563063 1520 ntBASIC15.5■□□□□ 0.07
CD48P09326 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 TMEM14DP-201ENST00000422205 345 ntBASIC15.5■□□□□ 0.07
CD48P09326 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 RN7SL752P-201ENST00000463779 287 ntBASIC15.5■□□□□ 0.07
CD48P09326 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 AP001889.1-201ENST00000525414 633 ntBASIC15.5■□□□□ 0.07
CD48P09326 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 GNRHR2-203ENST00000581100 1187 ntBASIC15.5■□□□□ 0.07
CD48P09326 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.5■□□□□ 0.07
CD48P09326 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CD48P09326 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CD48P09326 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD48P09326 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CD48P09326 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.49■□□□□ 0.07
CD48P09326 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms