Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 KRT8P34-201ENST00000577607 1044 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 REXO1L4P-201ENST00000605109 1937 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 OR52M2P-201ENST00000414298 959 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AL627095.1-201ENST00000414775 321 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 PPP1R2P4-201ENST00000424051 595 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 DUX4L50-201ENST00000455245 715 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 RN7SL524P-201ENST00000581152 300 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
CHD8Q9HCK8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHD8Q9HCK8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AC068880.1-201ENST00000507289 2297 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AL359092.2-201ENST00000423330 585 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ZNF877P-201ENST00000437614 612 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 RN7SL767P-201ENST00000493013 295 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 MIR6819-201ENST00000622122 61 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 TNRC18P3-201ENST00000441896 2691 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 TEKT4P2-202ENST00000559466 1312 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AL591122.2-201ENST00000624125 1853 ntBASIC13.54□□□□□ -0.24
CHD8Q9HCK8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHD8Q9HCK8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms