Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ELK1P1-201ENST00000485699 580 ntBASIC14.29□□□□□ -0.12
BBS4Q96RK4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 TERF1P3-201ENST00000505638 1227 ntBASIC14.29□□□□□ -0.12
BBS4Q96RK4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.29□□□□□ -0.12
BBS4Q96RK4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 AC140912.1-201ENST00000577171 1054 ntBASIC14.29□□□□□ -0.12
BBS4Q96RK4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 LINC00552-201ENST00000625151 2579 ntBASIC14.29□□□□□ -0.12
BBS4Q96RK4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.29□□□□□ -0.12
BBS4Q96RK4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 RNU1-114P-201ENST00000365297 166 ntBASIC14.28□□□□□ -0.12
BBS4Q96RK4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 AC114812.1-204ENST00000449669 728 ntBASIC14.28□□□□□ -0.12
BBS4Q96RK4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 AC022616.1-201ENST00000518688 554 ntBASIC14.28□□□□□ -0.12
BBS4Q96RK4 LRRC59-203ENST00000576448 1531 ntBASIC14.28□□□□□ -0.12
BBS4Q96RK4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BBS4Q96RK4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.28□□□□□ -0.12
BBS4Q96RK4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 MTHFR-210ENST00000641407 2387 ntBASIC14.27□□□□□ -0.12
BBS4Q96RK4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
BBS4Q96RK4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
BBS4Q96RK4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.27□□□□□ -0.12
BBS4Q96RK4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.27□□□□□ -0.12
BBS4Q96RK4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 KRT8P14-201ENST00000414254 1442 ntBASIC14.27□□□□□ -0.12
BBS4Q96RK4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BBS4Q96RK4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
BBS4Q96RK4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.27□□□□□ -0.12
BBS4Q96RK4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms