Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.3■□□□□ 0.52
RPGRQ92834 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPGRQ92834 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPGRQ92834 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 AC007292.2-201ENST00000593524 1812 ntBASIC18.29■□□□□ 0.52
RPGRQ92834 AL583805.1-201ENST00000391389 531 ntBASIC18.29■□□□□ 0.52
RPGRQ92834 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 AL512430.1-201ENST00000392575 860 ntBASIC18.29■□□□□ 0.52
RPGRQ92834 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.29■□□□□ 0.52
RPGRQ92834 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.29■□□□□ 0.52
RPGRQ92834 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 AC114501.1-201ENST00000445949 172 ntBASIC18.29■□□□□ 0.52
RPGRQ92834 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.29■□□□□ 0.52
RPGRQ92834 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
RPGRQ92834 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.29■□□□□ 0.52
RPGRQ92834 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.29■□□□□ 0.52
RPGRQ92834 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.29■□□□□ 0.52
RPGRQ92834 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPGRQ92834 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPGRQ92834 AC020658.6-201ENST00000623564 1870 ntBASIC18.29■□□□□ 0.52
RPGRQ92834 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.28■□□□□ 0.52
RPGRQ92834 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.28■□□□□ 0.52
RPGRQ92834 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 LINC01165-201ENST00000445190 1623 ntBASIC18.28■□□□□ 0.52
RPGRQ92834 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.28■□□□□ 0.52
RPGRQ92834 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.28■□□□□ 0.52
RPGRQ92834 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RPGRQ92834 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.28■□□□□ 0.52
RPGRQ92834 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.28■□□□□ 0.52
RPGRQ92834 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RPGRQ92834 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
RPGRQ92834 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.28■□□□□ 0.52
RPGRQ92834 AP000358.1-201ENST00000456260 156 ntBASIC18.28■□□□□ 0.52
RPGRQ92834 PHBP15-201ENST00000574228 665 ntBASIC18.28■□□□□ 0.52
RPGRQ92834 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.28■□□□□ 0.52
RPGRQ92834 MIR6842-201ENST00000612539 65 ntBASIC18.28■□□□□ 0.52
RPGRQ92834 AC092299.1-201ENST00000632679 757 ntBASIC18.28■□□□□ 0.52
RPGRQ92834 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.28■□□□□ 0.52
RPGRQ92834 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.28■□□□□ 0.52
RPGRQ92834 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RPGRQ92834 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RPGRQ92834 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.28■□□□□ 0.52
RPGRQ92834 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPGRQ92834 AC023024.2-201ENST00000623561 1993 ntBASIC18.28■□□□□ 0.52
RPGRQ92834 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.28■□□□□ 0.52
RPGRQ92834 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPGRQ92834 REXO1L2P-201ENST00000425429 2069 ntBASIC18.27■□□□□ 0.52
RPGRQ92834 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RPGRQ92834 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RPGRQ92834 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.27■□□□□ 0.52
RPGRQ92834 AC018629.1-201ENST00000623381 1736 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms