Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 AC139749.1-202ENST00000617529 3139 ntBASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCC2Q8TAQ2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 SNX29P1-201ENST00000548357 1007 ntBASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 MIR6775-201ENST00000617557 69 ntBASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 AL603764.1-201ENST00000636452 321 ntBASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 PDIA3P1-201ENST00000471856 1510 ntBASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCC2Q8TAQ2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 AC016694.1-201ENST00000434179 700 ntBASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 AC007551.1-201ENST00000457394 519 ntBASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 AC104989.1-201ENST00000519711 778 ntBASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCC2Q8TAQ2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 AC055811.4-201ENST00000624039 1754 ntBASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 HSPA7-201ENST00000445535 1927 ntBASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCC2Q8TAQ2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms