Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC21.05■□□□□ 0.96
CLTCQ00610 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC21.05■□□□□ 0.96
CLTCQ00610 ALG1L7P-201ENST00000502317 768 ntBASIC21.05■□□□□ 0.96
CLTCQ00610 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC21.05■□□□□ 0.96
CLTCQ00610 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.05■□□□□ 0.96
CLTCQ00610 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.05■□□□□ 0.96
CLTCQ00610 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.05■□□□□ 0.96
CLTCQ00610 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.05■□□□□ 0.96
CLTCQ00610 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLTCQ00610 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 CHCHD2P2-201ENST00000503744 321 ntBASIC21.05■□□□□ 0.96
CLTCQ00610 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.05■□□□□ 0.96
CLTCQ00610 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLTCQ00610 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CLTCQ00610 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CLTCQ00610 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 WARS-232ENST00000556645 2508 ntTSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 MPI-203ENST00000535694 1523 ntTSL 2 BASIC21.04■□□□□ 0.96
CLTCQ00610 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 SAT1-201ENST00000379251 801 ntTSL 2 BASIC21.04■□□□□ 0.96
CLTCQ00610 SAT1-202ENST00000379253 909 ntTSL 2 BASIC21.04■□□□□ 0.96
CLTCQ00610 SAT1-203ENST00000379254 868 ntTSL 3 BASIC21.04■□□□□ 0.96
CLTCQ00610 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.04■□□□□ 0.96
CLTCQ00610 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 RN7SL288P-201ENST00000490496 291 ntBASIC21.04■□□□□ 0.96
CLTCQ00610 RN7SL767P-201ENST00000493013 295 ntBASIC21.04■□□□□ 0.96
CLTCQ00610 AC008026.2-201ENST00000495438 348 ntBASIC21.04■□□□□ 0.96
CLTCQ00610 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLTCQ00610 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.04■□□□□ 0.96
CLTCQ00610 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC21.04■□□□□ 0.96
CLTCQ00610 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLTCQ00610 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.03■□□□□ 0.96
CLTCQ00610 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLTCQ00610 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 RN7SL147P-201ENST00000487345 298 ntBASIC21.03■□□□□ 0.96
CLTCQ00610 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC21.03■□□□□ 0.96
CLTCQ00610 AL021707.6-201ENST00000609212 491 ntBASIC21.03■□□□□ 0.96
CLTCQ00610 AC011462.4-201ENST00000616866 449 ntBASIC21.03■□□□□ 0.96
CLTCQ00610 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLTCQ00610 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC21.03■□□□□ 0.96
CLTCQ00610 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 PCDHGB8P-201ENST00000502926 1973 ntBASIC21.03■□□□□ 0.96
CLTCQ00610 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC21.03■□□□□ 0.96
CLTCQ00610 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLTCQ00610 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLTCQ00610 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLTCQ00610 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLTCQ00610 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLTCQ00610 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms