Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CX3CR1P49238 AC104596.2-201ENST00000512793 793 ntBASIC13.25□□□□□ -0.29
CX3CR1P49238 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.25□□□□□ -0.29
CX3CR1P49238 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CX3CR1P49238 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.25□□□□□ -0.29
CX3CR1P49238 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 INTS4P2-202ENST00000614726 2019 ntBASIC13.25□□□□□ -0.29
CX3CR1P49238 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 AC113367.3-201ENST00000508316 1912 ntBASIC13.25□□□□□ -0.29
CX3CR1P49238 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.25□□□□□ -0.29
CX3CR1P49238 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CX3CR1P49238 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.25□□□□□ -0.29
CX3CR1P49238 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.25□□□□□ -0.29
CX3CR1P49238 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CX3CR1P49238 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CX3CR1P49238 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
CX3CR1P49238 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CX3CR1P49238 BEND3P1-201ENST00000421591 1944 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 NUS1P3-201ENST00000423502 862 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 PMS2P2-201ENST00000425039 1128 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.24□□□□□ -0.29
CX3CR1P49238 AC092183.1-201ENST00000469884 875 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 INGX-202ENST00000489074 768 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 AC093004.1-201ENST00000508850 424 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 RNA5SP421-201ENST00000516864 134 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 AC055876.2-201ENST00000531834 546 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.24□□□□□ -0.29
CX3CR1P49238 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.24□□□□□ -0.29
CX3CR1P49238 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 BRI3BPP1-201ENST00000594224 787 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.24□□□□□ -0.29
CX3CR1P49238 BX539320.1-201ENST00000623759 877 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.24□□□□□ -0.29
CX3CR1P49238 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CX3CR1P49238 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CX3CR1P49238 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.24□□□□□ -0.29
CX3CR1P49238 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.24□□□□□ -0.29
CX3CR1P49238 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CX3CR1P49238 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CR1P49238 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CR1P49238 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms