Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM23P36406 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM23P36406 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.73□□□□□ -0.05
TRIM23P36406 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM23P36406 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TRIM23P36406 DUX4L46-201ENST00000566845 751 ntBASIC14.73□□□□□ -0.05
TRIM23P36406 MIR4783-201ENST00000580343 82 ntBASIC14.73□□□□□ -0.05
TRIM23P36406 MIR3615-201ENST00000581999 87 ntBASIC14.73□□□□□ -0.05
TRIM23P36406 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.73□□□□□ -0.05
TRIM23P36406 AC009955.4-201ENST00000597192 544 ntBASIC14.73□□□□□ -0.05
TRIM23P36406 AC007663.3-201ENST00000609632 465 ntBASIC14.73□□□□□ -0.05
TRIM23P36406 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM23P36406 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM23P36406 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM23P36406 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM23P36406 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 LINC01101-201ENST00000622953 1884 ntBASIC14.72□□□□□ -0.05
TRIM23P36406 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.72□□□□□ -0.05
TRIM23P36406 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.72□□□□□ -0.05
TRIM23P36406 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.72□□□□□ -0.05
TRIM23P36406 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.72□□□□□ -0.05
TRIM23P36406 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 AC005730.2-201ENST00000564549 1184 ntBASIC14.72□□□□□ -0.05
TRIM23P36406 AL023803.2-201ENST00000620080 638 ntBASIC14.72□□□□□ -0.05
TRIM23P36406 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM23P36406 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM23P36406 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM23P36406 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM23P36406 AC006058.4-201ENST00000624016 1670 ntBASIC14.71□□□□□ -0.05
TRIM23P36406 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRIM23P36406 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM23P36406 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM23P36406 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRIM23P36406 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRIM23P36406 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM23P36406 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 AC099548.2-209ENST00000480264 625 ntBASIC14.71□□□□□ -0.05
TRIM23P36406 AC091804.1-201ENST00000486888 567 ntBASIC14.71□□□□□ -0.05
TRIM23P36406 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.71□□□□□ -0.05
TRIM23P36406 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM23P36406 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms