Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RN7SL530P-201ENST00000485097 298 ntBASIC19.31■□□□□ 0.68
LTN1O94822 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.31■□□□□ 0.68
LTN1O94822 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.31■□□□□ 0.68
LTN1O94822 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LTN1O94822 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.31■□□□□ 0.68
LTN1O94822 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTN1O94822 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.31■□□□□ 0.68
LTN1O94822 CICP6-201ENST00000457191 2729 ntBASIC19.31■□□□□ 0.68
LTN1O94822 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.3■□□□□ 0.68
LTN1O94822 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.3■□□□□ 0.68
LTN1O94822 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.3■□□□□ 0.68
LTN1O94822 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LTN1O94822 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.3■□□□□ 0.68
LTN1O94822 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.3■□□□□ 0.68
LTN1O94822 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.3■□□□□ 0.68
LTN1O94822 PPP1R2P4-201ENST00000424051 595 ntBASIC19.3■□□□□ 0.68
LTN1O94822 AL161932.2-201ENST00000435436 679 ntBASIC19.3■□□□□ 0.68
LTN1O94822 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.3■□□□□ 0.68
LTN1O94822 CMC2-204ENST00000562713 573 ntTSL 3 BASIC19.3■□□□□ 0.68
LTN1O94822 CMC2-209ENST00000565108 399 ntTSL 2 BASIC19.3■□□□□ 0.68
LTN1O94822 AC141586.1-203ENST00000567242 366 ntBASIC19.3■□□□□ 0.68
LTN1O94822 AL133467.4-201ENST00000602953 725 ntBASIC19.3■□□□□ 0.68
LTN1O94822 AP000322.3-201ENST00000608665 388 ntBASIC19.3■□□□□ 0.68
LTN1O94822 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LTN1O94822 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.3■□□□□ 0.68
LTN1O94822 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LTN1O94822 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTN1O94822 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 AC006486.2-201ENST00000624246 2199 ntBASIC19.29■□□□□ 0.68
LTN1O94822 AP001184.1-201ENST00000637936 376 ntBASIC19.29■□□□□ 0.68
LTN1O94822 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.29■□□□□ 0.68
LTN1O94822 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.29■□□□□ 0.68
LTN1O94822 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC19.29■□□□□ 0.68
LTN1O94822 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.29■□□□□ 0.68
LTN1O94822 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.29■□□□□ 0.68
LTN1O94822 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTN1O94822 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LTN1O94822 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.28■□□□□ 0.68
LTN1O94822 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.28■□□□□ 0.68
LTN1O94822 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTN1O94822 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.28■□□□□ 0.68
LTN1O94822 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms