Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 RN7SL363P-201ENST00000482412 273 ntBASIC6.48□□□□□ -1.37
USH2AO75445 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 AC092284.1-201ENST00000511386 1289 ntBASIC6.48□□□□□ -1.37
USH2AO75445 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 TPST2P1-201ENST00000564073 1102 ntBASIC6.48□□□□□ -1.37
USH2AO75445 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 RN7SL440P-201ENST00000577855 343 ntBASIC6.48□□□□□ -1.37
USH2AO75445 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 MIR7848-201ENST00000617402 101 ntBASIC6.48□□□□□ -1.37
USH2AO75445 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 API5-202ENST00000420461 2009 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 PIFO-201ENST00000369737 746 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 RNF7-205ENST00000480908 782 ntTSL 4 BASIC6.48□□□□□ -1.37
USH2AO75445 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 AC120498.7-201ENST00000562876 330 ntBASIC6.48□□□□□ -1.37
USH2AO75445 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 RN7SL665P-201ENST00000578793 300 ntBASIC6.48□□□□□ -1.37
USH2AO75445 GAS7-216ENST00000583882 553 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 AC106782.5-201ENST00000616011 337 ntBASIC6.48□□□□□ -1.37
USH2AO75445 AC048382.6-201ENST00000621980 1223 ntBASIC6.48□□□□□ -1.37
USH2AO75445 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC003102.2-201ENST00000589195 1469 ntBASIC6.48□□□□□ -1.37
USH2AO75445 PGR-210ENST00000619228 3038 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC6.48□□□□□ -1.37
USH2AO75445 RN7SL87P-201ENST00000497657 288 ntBASIC6.48□□□□□ -1.37
USH2AO75445 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC067931.2-201ENST00000623655 2003 ntBASIC6.48□□□□□ -1.37
USH2AO75445 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC132872.4-202ENST00000622924 2756 ntBASIC6.48□□□□□ -1.37
USH2AO75445 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 SIRPB3P-201ENST00000340424 1216 ntBASIC6.47□□□□□ -1.37
USH2AO75445 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 OR52X1P-201ENST00000446117 914 ntBASIC6.47□□□□□ -1.37
USH2AO75445 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 OR52V1P-201ENST00000515557 898 ntBASIC6.47□□□□□ -1.37
USH2AO75445 URB1-AS1-201ENST00000534991 831 ntBASIC6.47□□□□□ -1.37
USH2AO75445 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 539.6 ms