Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP2AO43633 RN7SL713P-201ENST00000582127 302 ntBASIC16.88■□□□□ 0.29
CHMP2AO43633 PPY2P-201ENST00000582808 702 ntBASIC16.88■□□□□ 0.29
CHMP2AO43633 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 AC009093.2-202ENST00000620513 2079 ntBASIC16.88■□□□□ 0.29
CHMP2AO43633 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP2AO43633 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP2AO43633 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHMP2AO43633 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHMP2AO43633 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 HOMER2P2-201ENST00000451621 847 ntBASIC16.87■□□□□ 0.29
CHMP2AO43633 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 C2orf69P2-201ENST00000562032 1123 ntBASIC16.87■□□□□ 0.29
CHMP2AO43633 DUX4L45-201ENST00000566406 1057 ntBASIC16.87■□□□□ 0.29
CHMP2AO43633 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP2AO43633 RN7SL560P-201ENST00000577943 264 ntBASIC16.87■□□□□ 0.29
CHMP2AO43633 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.87■□□□□ 0.29
CHMP2AO43633 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.87■□□□□ 0.29
CHMP2AO43633 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP2AO43633 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP2AO43633 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CHMP2AO43633 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHMP2AO43633 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP2AO43633 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP2AO43633 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 BRWD1P1-201ENST00000401091 371 ntBASIC16.86■□□□□ 0.29
CHMP2AO43633 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP2AO43633 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP2AO43633 AL355994.2-201ENST00000447882 704 ntBASIC16.86■□□□□ 0.29
CHMP2AO43633 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.86■□□□□ 0.29
CHMP2AO43633 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP2AO43633 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms