Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.67■□□□□ 0.42
RNF41Q9H4P4 PPY2P-201ENST00000582808 702 ntBASIC17.67■□□□□ 0.42
RNF41Q9H4P4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF41Q9H4P4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.66■□□□□ 0.42
RNF41Q9H4P4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 ALG3P1-201ENST00000508806 1114 ntBASIC17.66■□□□□ 0.42
RNF41Q9H4P4 GCOM2-201ENST00000509133 1104 ntBASIC17.66■□□□□ 0.42
RNF41Q9H4P4 AC010328.2-201ENST00000597698 1111 ntBASIC17.66■□□□□ 0.42
RNF41Q9H4P4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 AC002472.3-201ENST00000640124 621 ntBASIC17.66■□□□□ 0.42
RNF41Q9H4P4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF41Q9H4P4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 KRT8P4-201ENST00000509735 1454 ntBASIC17.65■□□□□ 0.42
RNF41Q9H4P4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 RPS2P32-201ENST00000439199 892 ntBASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AP006547.1-201ENST00000563435 692 ntBASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF41Q9H4P4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms