Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 AC092573.1-201ENST00000433054 884 ntBASIC23.94■■□□□ 1.42
IFT140Q96RY7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 AC120498.7-201ENST00000562876 330 ntBASIC23.94■■□□□ 1.42
IFT140Q96RY7 ANKRD26P1-203ENST00000569528 966 ntBASIC23.94■■□□□ 1.42
IFT140Q96RY7 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 AC087481.3-201ENST00000602886 1894 ntBASIC23.94■■□□□ 1.42
IFT140Q96RY7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 KRT8P18-201ENST00000413425 1445 ntBASIC23.94■■□□□ 1.42
IFT140Q96RY7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
IFT140Q96RY7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 AL591424.3-201ENST00000614278 872 ntBASIC23.94■■□□□ 1.42
IFT140Q96RY7 HPX-213ENST00000615166 826 ntTSL 5 BASIC23.94■■□□□ 1.42
IFT140Q96RY7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 API5-203ENST00000455725 2257 ntTSL 2 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 RPL3P2-204ENST00000413027 1203 ntBASIC23.93■■□□□ 1.42
IFT140Q96RY7 FAM21EP-201ENST00000417804 985 ntBASIC23.93■■□□□ 1.42
IFT140Q96RY7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 AC092903.1-201ENST00000466506 262 ntBASIC23.93■■□□□ 1.42
IFT140Q96RY7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 URB1-AS1-201ENST00000534991 831 ntBASIC23.93■■□□□ 1.42
IFT140Q96RY7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 MIR4254-201ENST00000581063 76 ntBASIC23.93■■□□□ 1.42
IFT140Q96RY7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC23.93■■□□□ 1.42
IFT140Q96RY7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
IFT140Q96RY7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC006987.1-201ENST00000413610 527 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC073210.1-201ENST00000414799 232 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC098657.1-201ENST00000416270 1135 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC136604.1-202ENST00000425471 771 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 MIR2278-201ENST00000516344 96 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 RN7SL602P-201ENST00000578326 324 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 RN7SL718P-201ENST00000581254 303 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC073869.4-201ENST00000620841 800 ntBASIC23.92■■□□□ 1.42
IFT140Q96RY7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC23.92■■□□□ 1.42
IFT140Q96RY7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
IFT140Q96RY7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
IFT140Q96RY7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 AC117503.4-201ENST00000623229 1418 ntBASIC23.91■■□□□ 1.42
IFT140Q96RY7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 IGKV1OR-2-201ENST00000457995 350 ntBASIC23.91■■□□□ 1.42
IFT140Q96RY7 AC006116.2-201ENST00000589958 988 ntBASIC23.91■■□□□ 1.42
IFT140Q96RY7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IFT140Q96RY7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
IFT140Q96RY7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
IFT140Q96RY7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms