Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AC040169.1-201ENST00000565382 521 ntBASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 TCAM1P-207ENST00000485295 1537 ntBASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AC114271.1-201ENST00000612689 2813 ntBASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHMP6Q96FZ7 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 AL671277.1-201ENST00000429656 993 ntBASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 AL645728.2-202ENST00000641679 227 ntBASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHMP6Q96FZ7 AC004241.5-201ENST00000623870 2448 ntBASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP6Q96FZ7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms