Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 TDH-203ENST00000531764 1110 ntBASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 MIR6752-201ENST00000618442 71 ntBASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AL138709.1-201ENST00000614840 1693 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AC079776.1-201ENST00000401540 1152 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 ACA64.2-201ENST00000459014 129 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AC068587.3-201ENST00000526613 355 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 KRT17P8-201ENST00000540749 863 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 PTP4A1P2-201ENST00000546033 454 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 AC017083.2-201ENST00000608069 979 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 SALL4P5-201ENST00000419001 1760 ntBASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH19Q8TAB3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 AC112492.5-201ENST00000421897 457 ntBASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 AC007969.1-201ENST00000433675 447 ntBASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 AC007389.4-201ENST00000454674 793 ntBASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms